STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104220788Replication protein A 70 kDa DNA-binding subunit B-like isoform X1. (306 aa)    
Predicted Functional Partners:
LOC104243630
ATP-dependent DNA helicase Q-like SIM isoform X1.
    
 0.791
LOC104248626
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 0.791
LOC104228058
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.604
LOC104220841
Replication protein A 32 kDa subunit B-like isoform X1.
   
 0.591
LOC104232390
Replication protein A 32 kDa subunit A-like.
   
 0.591
LOC104217749
DNA helicase; Belongs to the MCM family.
   
 0.589
LOC104248140
Serine/threonine-protein kinase ATR isoform X1; Belongs to the PI3/PI4-kinase family.
    
 0.585
LOC104232208
Uncharacterized protein LOC104232208 isoform X1.
    
 0.530
LOC104234170
DNA helicase; Belongs to the MCM family.
   
 0.515
LOC104243330
Cell cycle checkpoint protein RAD17 isoform X1.
   
 0.486
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.