STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104217410Cyclin-dependent kinase 12-like isoform X1. (1035 aa)    
Predicted Functional Partners:
LOC104219495
Cleavage and polyadenylation specificity factor CPSF30-like isoform X1.
   
 0.995
LOC104236733
Cleavage and polyadenylation specificity factor CPSF30-like.
   
 0.995
LOC104238607
Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.
    
 0.982
LOC104240702
Uncharacterized protein LOC104240702.
  
 
0.982
LOC104223092
Cleavage stimulation factor subunit 3 isoform X1.
    
 0.981
LOC104236875
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.981
LOC104217145
2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
    
 0.963
LOC104210037
Uncharacterized protein LOC104210037.
    
 0.959
LOC104226802
Symplekin.
    
 0.959
LOC104210401
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
   
 
 0.947
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: low (26%) [HD]