STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104222064Transcription factor bHLH18-like. (356 aa)    
Predicted Functional Partners:
LOC104225311
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 
 0.743
LOC104220853
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 
 0.582
LOC104223689
Uncharacterized protein LOC104223689 isoform X1.
   
 
 0.582
LOC104211414
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
   
  
 0.531
LOC104249594
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
   
  
 0.531
LOC104240874
Acid beta-fructofuranosidase AIV-18; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.518
LOC104225622
Acid beta-fructofuranosidase-like; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.517
LOC104230861
Trehalase.
   
 
 0.511
LOC104249112
Trehalase.
   
 
 0.511
LOC104242808
Uncharacterized protein LOC104242808 isoform X1.
     
 0.502
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.