STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104223022Uncharacterized protein LOC104223022. (621 aa)    
Predicted Functional Partners:
LOC104230704
Uncharacterized protein LOC104230704.
  
     0.512
LOC104220530
Uncharacterized protein LOC104220530.
  
     0.501
LOC104240794
Uncharacterized protein LOC104240794.
  
     0.495
LOC104245276
Uncharacterized protein LOC104245276.
  
     0.487
LOC104224788
Uncharacterized protein LOC104224788.
  
     0.480
LOC104223316
Uncharacterized protein LOC104223316.
  
     0.477
LOC104249173
Uncharacterized protein LOC104249173.
  
     0.470
LOC104217768
Uncharacterized protein LOC104217768.
  
     0.465
LOC104237637
Uncharacterized protein LOC104237637.
  
     0.463
LOC104234933
Uncharacterized protein LOC104234933.
  
     0.463
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.