STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104224193methylcrotonoyl-CoA carboxylase beta chain, mitochondrial isoform X1. (582 aa)    
Predicted Functional Partners:
LOC104216169
methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.
  
 0.998
LOC104224018
2-methylacyl-CoA dehydrogenase, mitochondrial.
 
 
 0.987
LOC104228910
isovaleryl-CoA dehydrogenase, mitochondrial isoform X1.
 
 
 0.987
LOC104211567
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.983
LOC104243001
methylglutaconyl-CoA hydratase, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.977
LOC104216994
Probable enoyl-CoA hydratase, mitochondrial isoform X1.
  
 
 0.965
LOC104220829
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.949
LOC104213400
acyl-CoA dehydrogenase family member 10.
  
 
 0.911
LOC104212704
hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1.
 
 0.867
LOC104248364
malonyl-CoA-acyl carrier protein transacylase, mitochondrial.
  
 
 0.852
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.