STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104224509Transcription factor bHLH100-like isoform X1. (261 aa)    
Predicted Functional Partners:
LOC104244190
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.490
LOC104249044
Uncharacterized protein LOC104249044.
  
     0.480
LOC104212553
Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like isoform X1.
  
 
 
 0.477
LOC104225293
Uncharacterized protein LOC104225293.
  
     0.477
LOC104246671
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.475
LOC104239600
Uncharacterized protein LOC104239600.
  
     0.463
LOC104240081
Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like.
  
 
 
 0.456
LOC104223723
Uncharacterized protein LOC104223723.
  
     0.452
LOC104231250
Jacalin-related lectin 19.
  
     0.426
LOC104231813
chromodomain-helicase-DNA-binding protein 7-like isoform X1.
  
     0.417
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.