STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104221288Uncharacterized protein LOC104221288. (266 aa)    
Predicted Functional Partners:
LOC104221263
Transcription repressor OFP8-like.
  
     0.443
LOC104248806
Protein MIZU-KUSSEI 1-like.
  
     0.436
LOC104227443
Uncharacterized protein LOC104227443.
  
     0.426
LOC104216140
Protein MIZU-KUSSEI 1-like.
  
     0.425
LOC104221373
Uncharacterized protein LOC104221373.
  
     0.410
LOC104211189
WUSCHEL-related homeobox 2.
  
     0.405
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.