STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104225587Uncharacterized protein LOC104225587. (173 aa)    
Predicted Functional Partners:
LOC104239200
Uncharacterized protein LOC104239200.
  
     0.511
LOC104237019
Uncharacterized protein LOC104237019.
  
     0.484
LOC104224580
Probable 5-epi-aristolochene synthase 4.
  
     0.483
LOC104243796
Uncharacterized protein LOC104243796.
  
     0.480
LOC104247422
Purine permease 1-like isoform X1.
  
     0.480
LOC104214819
5-epi-aristolochene synthase-like.
  
     0.478
LOC104237559
Glutelin type-B 2-like.
  
     0.475
LOC104230520
Uncharacterized protein LOC104230520.
  
     0.473
LOC104218669
Uncharacterized protein LOC104218669.
  
     0.471
LOC104220447
Cysteine-rich repeat secretory protein 55.
  
     0.466
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.