STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104222292Probable ubiquitin-conjugating enzyme E2 18; Belongs to the ubiquitin-conjugating enzyme family. (161 aa)    
Predicted Functional Partners:
LOC104213286
Probable ubiquitin-conjugating enzyme E2 16; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.900
LOC104227774
Probable ubiquitin-conjugating enzyme E2 18.
  
  
 
0.900
LOC104241137
E3 ubiquitin-protein ligase UPL4 isoform X1.
    
 0.809
LOC104216286
E3 ubiquitin-protein ligase UPL3-like.
    
 0.808
LOC104222160
E3 ubiquitin-protein ligase UPL3-like.
    
 0.808
LOC104234422
E3 ubiquitin-protein ligase UPL3-like.
    
 0.808
LOC104247781
Ubiquitin-activating enzyme E1 1 isoform X1; Belongs to the ubiquitin-activating E1 family.
   
 0.806
LOC104249942
Ubiquitin-activating enzyme E1 1-like; Belongs to the ubiquitin-activating E1 family.
   
 0.806
LOC104236368
Ubiquitin-conjugating enzyme E2 32.
     
 0.804
LOC104237891
Ubiquitin-conjugating enzyme E2 4-like; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.742
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.