STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104223589Multiple C2 and transmembrane domain-containing protein 1-like. (768 aa)    
Predicted Functional Partners:
LOC104232264
Uncharacterized protein LOC104232264 isoform X1.
   
 0.542
LOC104249324
Chromatin structure-remodeling complex protein SYD.
   
 0.542
LOC104249574
Serine/threonine-protein kinase ULK3; Belongs to the protein kinase superfamily.
    
 0.501
LOC104228889
Retinoblastoma-binding protein 5 homolog isoform X1.
    
 0.470
LOC104249073
Heterogeneous nuclear ribonucleoprotein U-like protein 2.
    
 0.467
LOC104214575
Uncharacterized protein LOC104214575.
  
     0.420
LOC104243803
Uncharacterized protein LOC104243803.
  
     0.405
LOC104225265
Nuclear pore complex protein NUP160 homolog isoform X1.
    
 0.401
LOC104221755
Uncharacterized protein LOC104221755.
  
     0.400
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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