STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104224842Uncharacterized protein LOC104224842. (68 aa)    
Predicted Functional Partners:
LOC104213467
Uncharacterized protein LOC104213467 isoform X1.
  
     0.509
LOC104246148
Uncharacterized protein LOC104246148.
  
     0.502
LOC104240694
Uncharacterized protein LOC104240694.
  
     0.481
LOC104242663
Protein ULTRAPETALA 1-like.
  
     0.481
LOC104229046
Protein ULTRAPETALA 1-like isoform X1.
  
     0.475
LOC104232429
Uncharacterized protein LOC104232429.
  
     0.462
LOC104225881
Protein ROOT PRIMORDIUM DEFECTIVE 1.
  
     0.452
LOC104213028
Uncharacterized protein LOC104213028.
  
     0.449
LOC104215586
Uncharacterized protein LOC104215586.
  
     0.443
LOC104237539
Protein ULTRAPETALA 2-like isoform X1.
  
     0.442
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.