STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104230185Ubiquitin-conjugating enzyme E2 variant 1B-like. (164 aa)    
Predicted Functional Partners:
LOC104226783
Ubiquitin-conjugating enzyme E2 22; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.711
LOC104228058
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.703
LOC104213532
ubiquitin-40S ribosomal protein S27a.
   
 0.701
LOC104223017
ubiquitin-40S ribosomal protein S27a-like.
   
 0.701
LOC104225033
ubiquitin-40S ribosomal protein S27a-like.
   
 0.701
LOC104229371
Ubiquitin-conjugating enzyme E2 27; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.673
LOC104243826
Uncharacterized protein LOC104243826 isoform X1.
   
 0.673
LOC104228308
NEDD8-activating enzyme E1 catalytic subunit.
   
 
 0.668
LOC104236368
Ubiquitin-conjugating enzyme E2 32.
    
 0.658
LOC104244837
Ubiquitin-conjugating enzyme E2 19-like; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.655
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.