STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104226407Uncharacterized protein LOC104226407. (275 aa)    
Predicted Functional Partners:
LOC104244192
Uncharacterized protein LOC104244192 isoform X1.
      
 0.497
LOC104235477
Uncharacterized protein LOC104235477.
  
     0.490
LOC104218043
Uncharacterized protein LOC104218043.
  
     0.473
LOC104213685
Putative F-box protein At1g30920.
  
     0.463
LOC104240093
Uncharacterized protein LOC104240093.
  
     0.461
LOC104246501
Uncharacterized protein LOC104246501.
  
     0.450
LOC104216479
Uncharacterized protein LOC104216479.
  
     0.431
LOC104235863
Uncharacterized protein LOC104235863.
  
     0.429
LOC104212152
psbP domain-containing protein 3, chloroplastic.
      
 0.426
LOC104243091
Uncharacterized protein LOC104243091 isoform X1.
  
     0.423
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.