STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104232408dnaJ homolog 1, mitochondrial-like. (444 aa)    
Predicted Functional Partners:
LOC104241066
Stromal 70 kDa heat shock-related protein, chloroplastic-like; Belongs to the heat shock protein 70 family.
 
 0.850
LOC104225008
Stromal 70 kDa heat shock-related protein, chloroplastic; Belongs to the heat shock protein 70 family.
 
 0.849
LOC104210472
Heat shock 70 kDa protein 17.
 
 0.794
LOC104220313
Heat shock 70 kDa protein, mitochondrial-like; Belongs to the heat shock protein 70 family.
 
 0.767
LOC104228492
Heat shock 70 kDa protein, mitochondrial; Belongs to the heat shock protein 70 family.
 
 0.767
LOC104237078
Heat shock 70 kDa protein; Belongs to the heat shock protein 70 family.
 
 0.762
LOC104227119
Heat shock cognate 70 kDa protein 2-like; Belongs to the heat shock protein 70 family.
 
 0.760
LOC104229309
Heat shock 70 kDa protein-like.
 
 0.713
LOC104228095
Heat shock cognate 70 kDa protein 2-like; Belongs to the heat shock protein 70 family.
 
 0.709
LOC104218227
Luminal-binding protein 5-like; Belongs to the heat shock protein 70 family.
 
 0.706
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.