STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10423307850S ribosomal protein L18, chloroplastic-like. (118 aa)    
Predicted Functional Partners:
LOC104223111
E3 ubiquitin-protein ligase RKP-like.
   
 0.691
LOC104234881
E3 ubiquitin-protein ligase RKP.
   
 0.691
LOC104229313
28S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.680
rps14
30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.
    
 
 0.649
LOC104211509
50S ribosomal protein L4, chloroplastic.
   
 
 0.643
LOC104218292
Uncharacterized protein LOC104218292; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.624
LOC104228058
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.623
LOC104219745
50S ribosomal protein L13, chloroplastic.
   
 
 0.622
LOC104237771
54S ribosomal protein L51, mitochondrial isoform X1.
   
   0.615
LOC104211566
39S ribosomal protein L19, mitochondrial-like.
   
 
 0.612
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.