STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104228887Syntaxin-23-like. (160 aa)    
Predicted Functional Partners:
LOC104218412
VAMP-like protein YKT61; Belongs to the synaptobrevin family.
   
 0.861
LOC104248161
VAMP-like protein YKT61; Belongs to the synaptobrevin family.
   
 0.861
LOC104232649
Alpha-soluble NSF attachment protein-like.
    
 0.844
LOC104244747
Alpha-soluble NSF attachment protein.
    
 0.844
LOC104233793
Vacuolar protein-sorting-associated protein 33 homolog; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.828
LOC104212421
Vesicle-fusing ATPase.
   
 0.818
LOC104248576
Vesicle-fusing ATPase-like.
   
 0.818
LOC104223137
Vacuolar protein sorting-associated protein 11 homolog; Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment.
   
 
 0.817
LOC104238972
Vacuolar protein sorting-associated protein 18 homolog.
    
 
 0.809
LOC104243487
Gamma-soluble NSF attachment protein.
    
 0.799
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.