STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104231350Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. (650 aa)    
Predicted Functional Partners:
LOC104230247
4-alpha-glucanotransferase.
 
 
 0.976
LOC104234205
LOW QUALITY PROTEIN: 1,4-alpha-glucan-branching enzyme-like.
  
 
 0.973
LOC104242868
1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic-like isoform X1.
  
 
 0.970
LOC104239960
1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic isoform X1.
  
 
 0.968
LOC104218246
4-alpha-glucanotransferase DPE2.
  
 
 0.957
LOC104222724
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
  
  
0.915
LOC104219530
Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
  
 
 0.911
LOC104219747
Nudix hydrolase 14, chloroplastic.
    
  0.900
LOC104215019
Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
  
  
 0.888
LOC104212253
Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
  
  
 0.868
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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