STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104228781Uncharacterized protein LOC104228781 isoform X1. (82 aa)    
Predicted Functional Partners:
LOC104221703
Uncharacterized protein LOC104221703 isoform X1.
  
     0.519
LOC104212296
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1.
  
    0.503
LOC104211988
Uncharacterized protein LOC104211988.
  
     0.474
LOC104212579
Uncharacterized protein LOC104212579.
  
     0.469
LOC104222261
Protein NDR1-like.
  
     0.455
LOC104227501
F-box/LRR-repeat protein At1g67190-like.
  
     0.455
LOC104225339
Uncharacterized protein LOC104225339.
  
     0.444
LOC104215823
Uncharacterized protein LOC104215823.
  
     0.432
LOC104246293
Uncharacterized protein LOC104246293 isoform X1.
  
     0.429
LOC104226756
DNA-binding protein S1FA-like.
  
    0.428
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.