STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104232557ER membrane protein complex subunit 10. (305 aa)    
Predicted Functional Partners:
LOC104220711
ER membrane protein complex subunit 4.
   
 
 0.969
LOC104239589
Membrane magnesium transporter.
    
 
 0.965
LOC104213092
ER membrane protein complex subunit 2-A-like.
    
 
 0.941
LOC104217158
ER membrane protein complex subunit 2-like.
    
 
 0.941
LOC104211725
ER membrane protein complex subunit 1-like.
   
 
 0.936
LOC104234051
ER membrane protein complex subunit 1-like.
   
 
 0.936
LOC104234257
ER membrane protein complex subunit 3.
    
 
 0.934
LOC104242857
ER membrane protein complex subunit 3.
    
 
 0.934
LOC104223172
ER membrane protein complex subunit 7 homolog.
    
 
 0.924
LOC104223171
ER membrane protein complex subunit 7 homolog.
    
 
 0.924
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.