STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104229693Mannosyltransferase. (539 aa)    
Predicted Functional Partners:
LOC104214412
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
    
 0.969
LOC104224094
GPI ethanolamine phosphate transferase 1 isoform X1.
     
 0.964
LOC104228528
GPI mannosyltransferase 1; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. Transfers the first alpha-1,4-mannose to GlcN- acyl-PI during GPI precursor assembly.
     
 0.964
LOC104232366
Glycosylphosphatidylinositol anchor biosynthesis protein 11.
     
 0.964
LOC104235656
GPI ethanolamine phosphate transferase 3 isoform X1.
     
 0.964
LOC104218857
Phosphatidylinositol-glycan biosynthesis class X protein-like.
     
 0.947
LOC104229973
Phosphatidylinositol-glycan biosynthesis class X protein-like.
     
 0.947
LOC104234206
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
    
 0.925
LOC104210668
Phosphatidylinositol-glycan biosynthesis class X protein-like.
     
  0.900
LOC104243937
Phosphatidylinositol-glycan biosynthesis class X protein-like.
     
  0.900
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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