STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104232266Protein Mpv17; Belongs to the peroxisomal membrane protein PXMP2/4 family. (217 aa)    
Predicted Functional Partners:
LOC104235829
Peroxisome biogenesis protein 5.
     
 0.580
LOC104219814
Peroxisome biogenesis factor 10.
     
 0.558
LOC104211076
Peroxisome biogenesis protein 19-2-like.
    
 0.551
LOC104219082
Peroxisome biogenesis protein 19-1-like.
    
 0.551
LOC104228970
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.531
LOC104225936
Peroxisome biogenesis protein 3-2-like.
   
 
 0.496
LOC104239103
Peroxisome biogenesis protein 3-2-like.
   
 
 0.496
LOC104218031
Peroxisomal membrane protein PEX16.
     
 0.475
LOC104249108
Peroxisomal membrane protein PEX16.
     
 0.475
LOC104243468
Peroxisomal membrane protein 11-4.
  
 
 0.443
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.