STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104234578Uncharacterized protein LOC104234578 isoform X1. (797 aa)    
Predicted Functional Partners:
LOC104230607
Uncharacterized protein LOC104230607.
  
     0.471
LOC104215143
Uncharacterized protein LOC104215143.
  
     0.466
LOC104231328
Uncharacterized protein LOC104231328.
  
     0.441
LOC104220306
Uncharacterized protein LOC104220306 isoform X1.
  
     0.412
LOC104223509
Uncharacterized protein LOC104223509 isoform X1.
  
     0.408
LOC104227359
Golgin candidate 5 isoform X1.
  
     0.401
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.