STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104234757BEACH domain-containing protein lvsA isoform X1. (3595 aa)    
Predicted Functional Partners:
LOC104227290
Beclin-1-like protein isoform X1.
    
 
 0.745
LOC104221597
Autophagy protein 5; Required for autophagy.
    
 
 0.740
LOC104220494
Uncharacterized protein LOC104220494 isoform X1.
   
  
 0.726
LOC104221724
Peptidylprolyl isomerase.
      
 0.716
LOC104232208
Uncharacterized protein LOC104232208 isoform X1.
      
 0.710
LOC104237929
Armadillo repeat-containing protein 8 isoform X1.
  
   
 0.687
LOC104226938
AP-3 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
      
 0.673
LOC104223519
Dedicator of cytokinesis protein 7 isoform X1; Belongs to the DOCK family.
  
 
 0.662
LOC104221711
Myb family transcription factor APL isoform X1.
      
 0.657
LOC104247314
Transcription factor SPEECHLESS.
      
 0.657
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.