Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC104211829 | LOC104214399 | A0A1U7UYL2 | A0A1U7VKI7 | ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family. | Uncharacterized protein LOC104214399. | 0.708 |
LOC104211829 | LOC104223725 | A0A1U7UYL2 | A0A1U7W4H7 | ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family. | ATP-dependent Clp protease proteolytic subunit. | 0.880 |
LOC104211829 | LOC104232439 | A0A1U7UYL2 | A0A1U7X2R5 | ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family. | ATP-dependent Clp protease proteolytic subunit. | 0.728 |
LOC104211829 | LOC104234577 | A0A1U7UYL2 | A0A1U7X6J4 | ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family. | Chaperone protein ClpB3, chloroplastic; Belongs to the ClpA/ClpB family. | 0.716 |
LOC104211829 | LOC104242665 | A0A1U7UYL2 | A0A1U7YB67 | ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family. | ATP-dependent Clp protease proteolytic subunit. | 0.410 |
LOC104211829 | LOC104244219 | A0A1U7UYL2 | A0A1U7Y432 | ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family. | ATP-dependent Clp protease proteolytic subunit. | 0.893 |
LOC104211829 | LOC104246668 | A0A1U7UYL2 | A0A1U7YPS2 | ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family. | ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family. | 0.921 |
LOC104211829 | clpP | A0A1U7UYL2 | A0A1U8QDV1 | ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.959 |
LOC104214399 | LOC104211829 | A0A1U7VKI7 | A0A1U7UYL2 | Uncharacterized protein LOC104214399. | ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family. | 0.708 |
LOC104214399 | LOC104223725 | A0A1U7VKI7 | A0A1U7W4H7 | Uncharacterized protein LOC104214399. | ATP-dependent Clp protease proteolytic subunit. | 0.729 |
LOC104214399 | LOC104232439 | A0A1U7VKI7 | A0A1U7X2R5 | Uncharacterized protein LOC104214399. | ATP-dependent Clp protease proteolytic subunit. | 0.651 |
LOC104214399 | LOC104234577 | A0A1U7VKI7 | A0A1U7X6J4 | Uncharacterized protein LOC104214399. | Chaperone protein ClpB3, chloroplastic; Belongs to the ClpA/ClpB family. | 0.740 |
LOC104214399 | LOC104242665 | A0A1U7VKI7 | A0A1U7YB67 | Uncharacterized protein LOC104214399. | ATP-dependent Clp protease proteolytic subunit. | 0.659 |
LOC104214399 | LOC104244219 | A0A1U7VKI7 | A0A1U7Y432 | Uncharacterized protein LOC104214399. | ATP-dependent Clp protease proteolytic subunit. | 0.705 |
LOC104214399 | LOC104246668 | A0A1U7VKI7 | A0A1U7YPS2 | Uncharacterized protein LOC104214399. | ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family. | 0.658 |
LOC104214399 | clpP | A0A1U7VKI7 | A0A1U8QDV1 | Uncharacterized protein LOC104214399. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.716 |
LOC104223725 | LOC104211829 | A0A1U7W4H7 | A0A1U7UYL2 | ATP-dependent Clp protease proteolytic subunit. | ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family. | 0.880 |
LOC104223725 | LOC104214399 | A0A1U7W4H7 | A0A1U7VKI7 | ATP-dependent Clp protease proteolytic subunit. | Uncharacterized protein LOC104214399. | 0.729 |
LOC104223725 | LOC104225008 | A0A1U7W4H7 | A0A1U7W8V2 | ATP-dependent Clp protease proteolytic subunit. | Stromal 70 kDa heat shock-related protein, chloroplastic; Belongs to the heat shock protein 70 family. | 0.416 |
LOC104223725 | LOC104232439 | A0A1U7W4H7 | A0A1U7X2R5 | ATP-dependent Clp protease proteolytic subunit. | ATP-dependent Clp protease proteolytic subunit. | 0.919 |
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