STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104234637Monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic. (526 aa)    
Predicted Functional Partners:
LOC104215837
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
 
 
 0.997
LOC104231785
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
 
 
 0.996
LOC104243126
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
 
 
 0.996
LOC104243318
Riboflavin biosynthesis protein PYRD, chloroplastic.
 
  
 0.988
LOC104221024
Riboflavin synthase.
 
 0.985
LOC104227617
Riboflavin biosynthesis protein PYRR, chloroplastic.
 
  
 0.978
LOC104235303
Uncharacterized protein LOC104235303.
   
 
 0.949
LOC104226676
Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like.
  
  
 
0.902
LOC104234158
Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like.
  
  
 
0.902
LOC104222058
Cyclic pyranopterin monophosphate synthase, mitochondrial isoform X1.
    
  0.901
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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