STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104233689BES1/BZR1 homolog protein 4-like. (323 aa)    
Predicted Functional Partners:
LOC104221735
Zinc finger protein ZAT11-like.
  
     0.496
LOC104220977
Cold-regulated 413 plasma membrane protein 2-like.
  
     0.475
LOC104221292
Blue copper protein-like.
  
     0.462
LOC104216646
Uncharacterized protein LOC104216646 isoform X1.
  
     0.459
LOC104248465
Cold-regulated 413 plasma membrane protein 1-like.
  
     0.452
LOC104221877
Zinc finger protein ZAT10-like.
  
     0.448
LOC104241487
Polygalacturonase-1 non-catalytic subunit beta-like.
  
     0.443
LOC104249252
Transcription factor SCREAM2.
  
     0.443
LOC104244159
Uncharacterized protein LOC104244159.
  
     0.441
LOC104215540
Zinc finger protein ZAT8-like.
  
     0.440
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.