STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104231111DUF21 domain-containing protein At2g14520-like. (381 aa)    
Predicted Functional Partners:
LOC104216278
GMP synthase [glutamine-hydrolyzing].
  
 
 0.708
LOC104212375
Putative glutamine amidotransferase YLR126C.
    
 0.547
LOC104218893
Putative glutamine amidotransferase YLR126C.
    
 0.547
LOC104249304
Putative glutamine amidotransferase YLR126C.
    
 0.547
LOC104210477
Urease accessory protein D.
    
 0.501
LOC104222808
Bifunctional purine biosynthesis protein purH.
    
 0.501
LOC104227936
Uncharacterized protein LOC104227936 isoform X1.
    
 0.493
LOC104231322
Uncharacterized protein LOC104231322.
    
 0.493
LOC104242743
Uncharacterized protein LOC104242743.
  
  
 0.466
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.