STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104235967Tobamovirus multiplication protein 2A. (283 aa)    
Predicted Functional Partners:
LOC104214358
Tobamovirus multiplication protein 1 isoform X1.
    
 
 0.507
LOC104226223
Tobamovirus multiplication protein 1-like.
    
 
 0.507
LOC104222220
Tobamovirus multiplication protein 2B isoform X1.
      
 0.497
LOC104248705
Glucosidase 2 subunit beta.
      
 0.497
LOC104234153
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.
      
 0.471
LOC104239800
Pyruvate kinase; Belongs to the pyruvate kinase family.
      
 0.418
LOC104228806
ADP-ribosylation factor-like protein 8A; Belongs to the small GTPase superfamily. Arf family.
      
 0.407
LOC104234484
ADP-ribosylation factor-like protein 8A; Belongs to the small GTPase superfamily. Arf family.
      
 0.407
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.