STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104236342Delta(8)-fatty-acid desaturase-like. (439 aa)    
Predicted Functional Partners:
LOC104227957
Geranylgeranyl diphosphate reductase, chloroplastic.
  
 
 0.640
LOC104228313
Geranylgeranyl diphosphate reductase, chloroplastic-like.
  
 
 0.640
LOC104230596
delta(7)-sterol-C5(6)-desaturase-like; Belongs to the sterol desaturase family.
  
 
 0.615
LOC104235251
delta(7)-sterol-C5(6)-desaturase; Belongs to the sterol desaturase family.
  
 
 0.615
LOC104211339
Sphinganine C(4)-monooxygenase 1-like; Belongs to the sterol desaturase family.
  
 
 0.596
LOC104240023
Sphinganine C(4)-monooxygenase 1-like; Belongs to the sterol desaturase family.
  
 
 0.596
LOC104227542
Methylsterol monooxygenase 1-1-like; Belongs to the sterol desaturase family.
  
 
 0.567
LOC104225605
Methylsterol monooxygenase 1-1-like; Belongs to the sterol desaturase family.
  
 
 0.567
LOC104234121
Sphinganine C(4)-monooxygenase 1-like; Belongs to the sterol desaturase family.
  
 
 0.567
LOC104232522
Methylsterol monooxygenase 2-2; Belongs to the sterol desaturase family.
  
 
 0.567
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.