STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104235660Uncharacterized protein LOC104235660 isoform X1. (718 aa)    
Predicted Functional Partners:
LOC104212185
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
    
   0.483
LOC104239566
60S ribosomal protein L37a.
    
   0.483
LOC104235722
Protein BPS1, chloroplastic-like.
  
 
   0.462
LOC104232729
Flocculation protein FLO11-like isoform X1.
  
     0.453
LOC104246155
DELLA protein RGL1-like; Belongs to the GRAS family.
  
    0.442
LOC104246278
Uncharacterized protein LOC104246278.
  
     0.435
LOC104250057
Uncharacterized protein LOC104250057 isoform X1.
  
     0.433
LOC104223794
39S ribosomal protein L45, mitochondrial isoform X1.
   
 
 0.429
LOC104232856
DELLA protein GAI1-like; Belongs to the GRAS family.
  
    0.428
LOC104228502
Scarecrow-like protein 18; Belongs to the GRAS family.
  
    0.423
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.