STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104234004Actin-related protein 5 isoform X1; Belongs to the actin family. (720 aa)    
Predicted Functional Partners:
LOC104229714
Chromatin-remodeling complex subunit ies6.
    
 0.997
LOC104248563
Actin-related protein 9 isoform X1; Belongs to the actin family.
   
 0.993
LOC104234105
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.985
LOC104214487
Alpha/beta hydrolase domain-containing protein 17B.
    
 0.980
LOC104235816
Nuclear factor related to kappa-B-binding protein-like.
   
 0.980
LOC104239702
Uncharacterized protein LOC104239702.
   
 0.980
LOC104215555
DNA helicase INO80 isoform X1.
    
 0.977
LOC104218495
RNA polymerase II-associated protein 3 isoform X1.
   
 0.974
LOC104212663
RuvB-like helicase.
    
 0.964
LOC104222099
RuvB-like helicase.
    
 0.964
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.