STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104237903LOW QUALITY PROTEIN: mitogen-activated protein kinase kinase kinase A-like; Belongs to the protein kinase superfamily. (325 aa)    
Predicted Functional Partners:
LOC104218336
Mitogen-activated protein kinase kinase 3 isoform X1.
  
0.935
LOC104215021
Uncharacterized protein LOC104215021.
    
 0.496
LOC104226493
Uncharacterized protein LOC104226493.
    
 0.496
LOC104241166
Serine/threonine-protein kinase 3/4-like isoform X1.
  
 
0.490
LOC104212028
Probable serine/threonine-protein kinase At1g18390.
  
 
  0.488
LOC104238826
Probable serine/threonine-protein kinase RLCKVII.
  
 
  0.474
LOC104242115
Probable receptor-like serine/threonine-protein kinase At5g57670.
  
 
  0.464
LOC104239750
Probable serine/threonine-protein kinase At1g01540.
  
 
  0.463
LOC104218959
Probable serine/threonine-protein kinase At1g01540.
  
 
  0.459
LOC104218434
Probable receptor-like serine/threonine-protein kinase At5g57670 isoform X1; Belongs to the protein kinase superfamily.
  
 
  0.457
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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