STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104238084Uncharacterized protein LOC104238084. (127 aa)    
Predicted Functional Partners:
LOC104230602
Uncharacterized protein LOC104230602.
  
 
  0.559
LOC104238877
Uncharacterized protein LOC104238877.
  
 
  0.558
LOC104229434
Uncharacterized protein LOC104229434.
  
 
  0.556
LOC104223870
Uncharacterized protein LOC104223870.
  
     0.541
LOC104213788
Uncharacterized protein LOC104213788.
  
 
  0.539
LOC104211449
Uncharacterized protein LOC104211449.
  
     0.534
LOC104247792
Uncharacterized protein LOC104247792.
  
     0.534
LOC104247724
Uncharacterized protein LOC104247724.
  
 
  0.524
LOC104246132
Uncharacterized protein LOC104246132.
  
     0.518
LOC104229241
Uncharacterized protein LOC104229241.
  
     0.516
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.