STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104235153Uncharacterized protein LOC104235153 isoform X1. (985 aa)    
Predicted Functional Partners:
LOC104239178
Uncharacterized protein LOC104239178.
  
 
 0.744
LOC104227948
Uncharacterized protein LOC104227948.
 
     0.665
LOC104225778
Uncharacterized protein LOC104225778.
  
  
 0.556
LOC104216049
Uncharacterized protein LOC104216049.
 
     0.541
LOC104221276
Piezo-type mechanosensitive ion channel homolog isoform X1.
  
     0.538
LOC104234757
BEACH domain-containing protein lvsA isoform X1.
  
    0.521
LOC104230792
Uncharacterized protein LOC104230792.
  
     0.488
LOC104239844
Uncharacterized protein LOC104239844 isoform X1.
  
     0.464
LOC104230319
Uncharacterized protein LOC104230319.
  
     0.460
LOC104220854
Uncharacterized protein LOC104220854.
  
     0.454
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.