STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104240134Cytochrome b561 and DOMON domain-containing protein At3g61750-like. (211 aa)    
Predicted Functional Partners:
LOC104225529
54S ribosomal protein L24, mitochondrial.
   
 
 0.618
LOC104227650
LOW QUALITY PROTEIN: uncharacterized protein LOC104227650.
  
   0.573
LOC104242626
Protein PXR1.
  
 
   0.556
LOC104218292
Uncharacterized protein LOC104218292; Belongs to the universal ribosomal protein uS5 family.
   
   0.533
LOC104245264
Uncharacterized protein LOC104245264 isoform X1.
  
 
   0.529
LOC104237656
Uncharacterized protein LOC104237656.
  
    0.527
LOC104244506
54S ribosomal protein L34, mitochondrial.
   
 
 0.525
LOC104237771
54S ribosomal protein L51, mitochondrial isoform X1.
    
   0.516
LOC104210362
Sulfated surface glycoprotein 185-like.
   
   0.512
LOC104232643
39S ribosomal protein L46, mitochondrial.
   
   0.512
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.