STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104241696U-box domain-containing protein 52-like. (267 aa)    
Predicted Functional Partners:
LOC104221607
Uncharacterized protein LOC104221607.
  
     0.533
LOC104239707
Uncharacterized protein LOC104239707.
  
     0.523
LOC104215288
Uncharacterized protein LOC104215288.
  
     0.517
LOC104210584
Uncharacterized protein DDB_G0286447-like.
  
     0.512
LOC104213538
Putative UPF0481 protein At3g02645.
  
     0.505
LOC104221135
Uncharacterized protein LOC104221135.
  
 
  0.504
LOC104221619
Putative UPF0481 protein At3g02645.
  
     0.504
LOC104213031
Putative UPF0481 protein At3g02645.
  
     0.503
LOC104239646
Transcription factor bHLH55-like.
  
     0.502
LOC104242663
Protein ULTRAPETALA 1-like.
  
     0.499
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.