STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104239598Transcription initiation factor TFIID subunit 11-like. (211 aa)    
Predicted Functional Partners:
LOC104235781
Transcription initiation factor TFIID subunit 2 isoform X1.
    
 0.998
LOC104234090
Transcription initiation factor TFIID subunit 1 isoform X1.
    
 0.998
LOC104216835
Transcription initiation factor TFIID subunit 13.
    
 0.997
LOC104218638
Transcription initiation factor TFIID subunit 9.
   
 0.997
LOC104241198
Transcription initiation factor TFIID subunit 7 isoform X1.
    
 0.996
LOC104218489
Transcription initiation factor TFIID subunit 6-like.
    
 0.988
LOC104216655
Transcription initiation factor TFIID subunit 6-like isoform X1.
    
 0.988
LOC104248843
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
 0.987
LOC104216191
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
   
 0.983
LOC104216226
Transcription initiation factor TFIID subunit 4b-like isoform X1.
    
 0.983
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.