STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104241772Uncharacterized protein LOC104241772. (274 aa)    
Predicted Functional Partners:
LOC104210859
Uncharacterized protein LOC104210859.
  
     0.438
LOC104249912
Uncharacterized protein LOC104249912.
  
     0.434
LOC104223408
Uncharacterized protein LOC104223408.
  
     0.430
LOC104235875
Uncharacterized protein LOC104235875.
  
     0.429
LOC104217473
Uncharacterized protein LOC104217473.
  
     0.426
LOC104249896
Uncharacterized protein LOC104249896.
  
     0.426
LOC104233580
Uncharacterized protein LOC104233580.
  
     0.423
LOC104212738
Uncharacterized protein LOC104212738.
  
     0.414
LOC104228587
Uncharacterized protein LOC104228587.
  
     0.410
LOC104235444
Uncharacterized protein LOC104235444.
  
     0.408
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.