STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104241272Small ubiquitin-related modifier. (103 aa)    
Predicted Functional Partners:
LOC104216607
SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family.
   
 0.952
LOC104228058
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.921
LOC104230404
SUMO-conjugating enzyme SCE1-like; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.920
LOC104222013
SUMO-conjugating enzyme SCE1-like; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.918
LOC104232016
SUMO-conjugating enzyme SCE1; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.918
LOC104239979
SUMO-conjugating enzyme SCE1-like; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.918
LOC104229403
SUMO-activating enzyme subunit 1B-1-like.
   
 0.874
LOC104230276
SUMO-activating enzyme subunit 1B-1-like.
   
 0.874
LOC104214600
Structural maintenance of chromosomes protein 5.
   
 0.814
LOC104211244
RAN GTPase-activating protein 2.
    
 0.811
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.