STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104241424Scarecrow-like protein 4; Belongs to the GRAS family. (602 aa)    
Predicted Functional Partners:
LOC104227908
Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.
  
     0.493
LOC104232311
Pentatricopeptide repeat-containing protein At3g14580, mitochondrial-like.
  
     0.487
LOC104245525
Auxin-induced protein 6B-like.
  
     0.479
LOC104232987
Uncharacterized protein LOC104232987.
  
     0.478
LOC104244818
Uncharacterized protein LOC104244818.
  
     0.478
LOC104243041
Uncharacterized protein LOC104243041.
  
     0.477
LOC104235590
Auxin-induced protein 6B-like.
  
     0.472
LOC104245526
Uncharacterized protein LOC104245526.
  
     0.472
LOC104213152
Auxin-induced protein 6B-like.
  
     0.467
LOC104215719
Auxin-induced protein 6B-like.
  
     0.464
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.