STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104241938Uncharacterized protein LOC104241938. (168 aa)    
Predicted Functional Partners:
LOC104210300
Protein GAMETE EXPRESSED 2.
    
 
 0.769
LOC104218211
ELKS/Rab6-interacting/CAST family member 1-like.
     
 0.591
LOC104216161
Protein NAP1.
   
 
 0.557
LOC104232264
Uncharacterized protein LOC104232264 isoform X1.
    
  0.530
LOC104249324
Chromatin structure-remodeling complex protein SYD.
    
  0.530
LOC104247178
Protein ABIL1.
     
 0.527
LOC104214784
Protein DA1-related 1-like.
    
 0.512
LOC104217662
Protein DA1-like.
    
 0.512
LOC104220592
LOW QUALITY PROTEIN: probable disease resistance protein At5g66900; Belongs to the disease resistance NB-LRR family.
    
 0.512
LOC104224297
Protein DA1-related 6-like.
    
 0.512
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.