STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104243329Uncharacterized protein LOC104243329. (628 aa)    
Predicted Functional Partners:
LOC104212209
Uncharacterized protein LOC104212209.
  
     0.467
LOC104243586
F-box only protein 6.
  
     0.452
LOC104248711
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
  
  0.451
LOC104245907
Uncharacterized protein LOC104245907.
  
 
  0.433
LOC104223119
Mitochondrial substrate carrier family protein E; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
     0.428
LOC104216726
LOW QUALITY PROTEIN: UDP-glycosyltransferase 74F2-like.
  
     0.426
LOC104217938
Uncharacterized protein LOC104217938.
  
     0.426
LOC104237277
Pentatricopeptide repeat-containing protein At2g30100, chloroplastic isoform X1.
  
     0.426
LOC104244190
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.413
LOC104232543
Uncharacterized protein LOC104232543.
  
     0.411
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.