STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104247038Immediate early response 3-interacting protein 1-like isoform X1. (100 aa)    
Predicted Functional Partners:
LOC104230147
Protein YIPF.
   
 
 0.573
LOC104238486
Protein YIPF.
   
 
 0.573
LOC104235175
Protein KRTCAP2 homolog.
   
  
 0.480
LOC104234035
Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase.
      
 0.470
LOC104243950
Probable inactive tRNA-specific adenosine deaminase-like protein 3.
      
 0.439
LOC104236837
Ergosterol biosynthetic protein 28.
      
 0.431
LOC104220703
Protein YIF1B-like.
    
 
 0.418
LOC104221649
Protein YIF1B-like.
    
 
 0.418
LOC104247065
Protein YIF1B-like isoform X1.
    
 
 0.418
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.