STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104243570Gibberellin-regulated protein 5-like. (107 aa)    
Predicted Functional Partners:
LOC104246786
Uncharacterized protein LOC104246786.
  
     0.543
LOC104222128
Probable xyloglucan endotransglucosylase/hydrolase protein isoform X1.
  
     0.542
LOC104214138
Tetraspanin-5-like.
  
     0.538
LOC104219941
Uncharacterized protein LOC104219941.
  
     0.537
LOC104227139
Protein GLUTAMINE DUMPER 6-like.
  
     0.537
LOC104241941
Uncharacterized protein LOC104241941.
  
     0.537
LOC104246561
Cytochrome P450 CYP736A12-like.
  
     0.537
LOC104241996
Uncharacterized protein LOC104241996.
  
     0.536
LOC104248118
Protein GIGANTEA-like.
  
   
 0.536
LOC104245351
Purine permease 1-like.
  
     0.535
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.