STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104247335LOB domain-containing protein 22-like. (200 aa)    
Predicted Functional Partners:
LOC104215299
LOB domain-containing protein 12-like.
  
     0.542
LOC104237636
Uncharacterized protein LOC104237636.
  
     0.539
LOC104213182
Uncharacterized protein LOC104213182.
  
     0.538
LOC104246170
Isopentenyl-diphosphate Delta-isomerase I-like.
  
     0.537
LOC104211577
Transcription factor PIF1-like isoform X1.
  
     0.534
LOC104246516
Uncharacterized protein At1g04910-like isoform X1.
  
     0.534
LOC104245623
UDP-galactose/UDP-glucose transporter 4-like.
  
     0.533
LOC104211432
Uncharacterized protein LOC104211432.
  
     0.528
LOC104233895
Uncharacterized protein At1g04910-like.
  
     0.528
LOC104245888
Zinc-finger homeodomain protein 5-like.
  
     0.527
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.