STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104244650HMG-Y-related protein A-like. (163 aa)    
Predicted Functional Partners:
LOC104224038
Basic 7S globulin-like; Belongs to the peptidase A1 family.
  
  0.466
LOC104222257
Uncharacterized protein LOC104222257.
  
  0.465
LOC104232984
Uncharacterized protein LOC104232984.
  
     0.444
LOC104242525
Probable membrane-associated kinase regulator 4.
  
     0.440
LOC104240815
Uncharacterized protein At1g66480-like.
  
     0.429
LOC104227885
Vacuolar-processing enzyme-like.
  
    0.427
LOC104221118
Uncharacterized protein LOC104221118.
  
     0.420
LOC104224718
Non-specific lipid-transfer protein 3-like.
  
 
   0.418
LOC104213349
Uncharacterized protein LOC104213349.
  
     0.416
LOC104210168
Basic 7S globulin-like; Belongs to the peptidase A1 family.
  
  0.411
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.