STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104245304VIN3-like protein 2 isoform X1. (756 aa)    
Predicted Functional Partners:
LOC104223642
Uncharacterized protein LOC104223642 isoform X1.
  
 0.818
LOC104212058
acetyl-CoA acetyltransferase, cytosolic 1-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.728
LOC104214082
acetyl-CoA acetyltransferase, cytosolic 1 isoform X1; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.728
LOC104232816
3-ketoacyl-CoA thiolase 2, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.728
LOC104235602
acetyl-CoA acetyltransferase, cytosolic 1-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.728
LOC104242888
3-ketoacyl-CoA thiolase 2, peroxisomal-like isoform X1; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.728
LOC104225088
Electron transfer flavoprotein subunit beta, mitochondrial.
  
 0.701
LOC104215910
Electron transfer flavoprotein subunit alpha, mitochondrial.
  
 0.646
rps2
30S ribosomal protein S2, chloroplastic.
    
 
 0.643
LOC104222424
Uncharacterized protein LOC104222424.
  
 
   0.630
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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