STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104245346Glucan endo-1,3-beta-glucosidase-like; Belongs to the glycosyl hydrolase 17 family. (386 aa)    
Predicted Functional Partners:
LOC104232816
3-ketoacyl-CoA thiolase 2, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.574
LOC104242888
3-ketoacyl-CoA thiolase 2, peroxisomal-like isoform X1; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.574
LOC104233747
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.566
LOC104212058
acetyl-CoA acetyltransferase, cytosolic 1-like; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.539
LOC104214082
acetyl-CoA acetyltransferase, cytosolic 1 isoform X1; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.539
LOC104235602
acetyl-CoA acetyltransferase, cytosolic 1-like; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.539
LOC104228970
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.533
LOC104230501
Glucan endo-1,3-beta-glucosidase 6-like; Belongs to the glycosyl hydrolase 17 family.
  
0.505
LOC104228749
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.503
LOC104232031
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.503
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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