STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104247881Uncharacterized protein LOC104247881 isoform X1. (691 aa)    
Predicted Functional Partners:
LOC104210349
Uridine 5'-monophosphate synthase.
  
  
 0.652
LOC104214902
Allantoinase isoform X1.
  
  
 0.588
LOC104241758
Dihydropyrimidinase.
  
  
 0.588
LOC104229380
Uncharacterized permease C29B12.14c.
  
  
 0.587
LOC104211993
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
  
 0.548
LOC104250053
Dihydropyrimidine dehydrogenase [NADP(+)].
  
  
 0.548
LOC104213085
Uncharacterized protein LOC104213085 isoform X1.
  
     0.511
LOC104210546
Vesicle transport protein GOT1B.
  
  
 0.506
LOC104217960
Vesicle transport protein GOT1B-like.
  
  
 0.506
LOC104238639
Vesicle transport protein GOT1B-like.
  
  
 0.506
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.