STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104246233G-protein coupled receptor 1. (321 aa)    
Predicted Functional Partners:
LOC104232511
Guanine nucleotide-binding protein alpha-1 subunit.
    
 0.686
LOC104232264
Uncharacterized protein LOC104232264 isoform X1.
   
 0.542
LOC104249324
Chromatin structure-remodeling complex protein SYD.
   
 0.542
LOC104230833
Guanine nucleotide-binding protein subunit gamma 3 isoform X1.
   
 0.523
LOC104249574
Serine/threonine-protein kinase ULK3; Belongs to the protein kinase superfamily.
    
 0.501
LOC104221599
Tobamovirus multiplication protein 1.
      
 0.497
LOC104228054
Regulator of G-protein signaling 1.
      
 0.497
LOC104228889
Retinoblastoma-binding protein 5 homolog isoform X1.
    
 0.470
LOC104249073
Heterogeneous nuclear ribonucleoprotein U-like protein 2.
    
 0.467
LOC104240248
Extra-large guanine nucleotide-binding protein 1.
    
 0.452
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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